We work at the interface of industry and medicine. While we have completed projects with various lactic acid bacteria, most of our research focuses on Limosilactobacillus reuteri, until recently known as Lactobacillus reuteri. L. reuteri is an important gut symbiont, and select strains have demonstrated health-promoting, i.e., probiotic, properties. The ultimate goal of our research program is to understand probiotic mechanisms towards the development of next-generation probiotics.
For many years, we have invested in developing genetic tools for use in L. reuteri and other lactic acid bacteria. As a consequence, our laboratory is at the forefront of lactic acid bacteria genome editing. These genome editing tools place us in the exciting position to pursue research in the following areas:
(1) to unravel the molecular underpinnings by which probiotic bacteria interact with the vertebrate host;
(2) to unravel the tripartite interplay between diet, a probiotic, and its bacteriophages;
(3) to develop probiotic bacteria as therapeutic delivery vehicles.
Alejandro González-Delgado, Laura Bonillo-Lopez, Milo S Johnson, Nastassia Knödlseder, Ching-Chung Ko, Yassir Lekbach, Jee-Hwan Oh, Hemaa Selvakumar, Michael C Wold, Zihan Yu, Virginia Aragón, Jeffrey A Gralnick, Marc Güell, Graham F Hatfull, Benjamin K Keitz, Britt Koskella, Vivek K Mutalik, Jan-Peter van Pijkeren, Seth L Shipman 2025. Genome editing of phylogenetically distinct bacteria using portable retron-mediated recombineering.
bioRxiv : the preprint server for biology Dale Archer, María Elisa Pérez-Muñoz, Stephanie Tollenaar, Simona Veniamin, Naomi Hotte, Christopher C Cheng, Kristoff Nieves, Jee-Hwan Oh, Lilian Morceli, Susan Muncner, Daniel R Barreda, Gurumoorthy Krishnamoorthy, Christopher Power, Jan-Peter van Pijkeren, Jens Walter 2025. A secondary metabolite of Limosilactobacillusreuteri R2lc drives strain-specific pathology in a spontaneous mouse model of multiple sclerosis.
Cell reports Fukang She, Brent W Anderson, Daven B Khana, Shenwei Zhang, Wieland Steinchen, Danny K Fung, Nathalie G Lesser, Lauren N Lucas, David M Stevenson, Theresa J Astmann, Gert Bange, Jan-Peter van Pijkeren, Daniel Amador-Noguez, Jue D Wang 2025. Allosteric regulation of pyruvate kinase enables efficient and robust gluconeogenesis by preventing metabolic conflicts and carbon overflow.
mSystems Laura M Alexander, Saima Khalid, Gina M Gallego-Lopez, Theresa J Astmann, Jee-Hwan Oh, Mark Heggen, Phil Huss, Renee Fisher, Amitava Mukherjee, Srivatsan Raman, In Young Choi, Morgan N Smith, Claude J Rogers, Michael W Epperly, Laura J Knoll, Joel S Greenberger, Jan-Peter van Pijkeren 2024. Development of a Limosilactobacillus reuteri therapeutic delivery platform with reduced colonization potential.
Applied and environmental microbiology Fukang She, Brent W Anderson, Daven B Khana, Shenwei Zhang, Wieland Steinchen, Danny K Fung, Lauren N Lucas, Nathalie G Lesser, David M Stevenson, Theresa J Astmann, Gert Bange, Jan-Peter van Pijkeren, Daniel Amador-Noguez, Jue D Wang 2024. Allosteric Regulation of Pyruvate Kinase Enables Efficient and Robust Gluconeogenesis by Preventing Metabolic Conflicts and Carbon Overflow.
bioRxiv : the preprint server for biology Diala F Hamade, Michael W Epperly, Renee Fisher, Wen Hou, Donna Shields, Jan-Peter van Pijkeren, Brian J Leibowitz, Lan G Coffman, Hong Wang, M Saiful Huq, Ziyu Huang, Claude J Rogers, Anda M Vlad, Joel S Greenberger, Amitava Mukherjee 2024. Genetically Engineered Probiotic Limosilactobacillus reuteri Releasing IL-22 (LR-IL-22) Modifies the Tumor Microenvironment, Enabling Irradiation in Ovarian Cancer.
Cancers Yuying Liu, Shabba A Armbrister, Beanna Okeugo, Tingting W Mills, Rhea C Daniel, Jee-Hwan Oh, Jan-Peter van Pijkeren, Evelyn S Park, Zeina M Saleh, Sharmistha Lahiri, Stefan Roos, JMarc Rhoads 2023. Probiotic-Derived Ecto-5'-Nucleotidase Produces Anti-Inflammatory Adenosine Metabolites in Treg-Deficient Scurfy Mice.
Probiotics and antimicrobial proteins View all Publications @ PubMed